Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NIG5292_02878 | NIG5292_02879 | GCA_001049735_02877 | GCA_001049735_02878 | Unannotated protein. | Unannotated protein. | 0.420 |
NIG5292_02879 | NIG5292_02878 | GCA_001049735_02878 | GCA_001049735_02877 | Unannotated protein. | Unannotated protein. | 0.420 |
NIG5292_02879 | guaA_1 | GCA_001049735_02878 | GCA_001049735_00303 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.412 |
NIG5292_02879 | pdxJ | GCA_001049735_02878 | GCA_001049735_00968 | Unannotated protein. | Unannotated protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | 0.936 |
NIG5292_02879 | phrA_2 | GCA_001049735_02878 | GCA_001049735_02651 | Unannotated protein. | Unannotated protein. | 0.413 |
NIG5292_02879 | ribBA | GCA_001049735_02878 | GCA_001049735_00539 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.451 |
NIG5292_02879 | ribD | GCA_001049735_02878 | GCA_001049735_00533 | Unannotated protein. | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.414 |
NIG5292_02879 | thiD | GCA_001049735_02878 | GCA_001049735_01747 | Unannotated protein. | Unannotated protein. | 0.411 |
guaA_1 | NIG5292_02879 | GCA_001049735_00303 | GCA_001049735_02878 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein. | 0.412 |
guaA_1 | pdxJ | GCA_001049735_00303 | GCA_001049735_00968 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | 0.545 |
guaA_1 | ribBA | GCA_001049735_00303 | GCA_001049735_00539 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.724 |
guaA_1 | ribD | GCA_001049735_00303 | GCA_001049735_00533 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.683 |
guaA_1 | thiD | GCA_001049735_00303 | GCA_001049735_01747 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein. | 0.417 |
pdxJ | NIG5292_02879 | GCA_001049735_00968 | GCA_001049735_02878 | Unannotated protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | Unannotated protein. | 0.936 |
pdxJ | guaA_1 | GCA_001049735_00968 | GCA_001049735_00303 | Unannotated protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.545 |
pdxJ | ribBA | GCA_001049735_00968 | GCA_001049735_00539 | Unannotated protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.554 |
pdxJ | ribD | GCA_001049735_00968 | GCA_001049735_00533 | Unannotated protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.616 |
phrA_2 | NIG5292_02879 | GCA_001049735_02651 | GCA_001049735_02878 | Unannotated protein. | Unannotated protein. | 0.413 |
ribBA | NIG5292_02879 | GCA_001049735_00539 | GCA_001049735_02878 | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | Unannotated protein. | 0.451 |
ribBA | guaA_1 | GCA_001049735_00539 | GCA_001049735_00303 | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.724 |
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