STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO03683.1Nucleoside-binding protein. (350 aa)    
Predicted Functional Partners:
SIO03707.1
Nucleoside ABC transporter ATP-binding protein.
 
 
 0.991
SIO03751.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.987
SIO03730.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.986
SIN85485.1
Nucleoside ABC transporter ATP-binding protein.
 
 
 0.975
SIN85446.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.961
SIN85468.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.960
rbsA
Ribose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  
  0.517
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.516
SIO03663.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family; Belongs to the FtsK/SpoIIIE/SftA family.
       0.463
Your Current Organism:
Carnobacterium alterfunditum
NCBI taxonomy Id: 28230
Other names: ACAM 313, ATCC 49837, C. alterfunditum, CCUG 34643, CIP 105796, Carnibacterium alterfunditum, DSM 5972, IFO 15548, JCM 12498, LMG 13520, LMG:13520, NBRC 15548, strain pf4
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