STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1I8G7C5DNA ligase. (1000 aa)    
Predicted Functional Partners:
A0A267EQ27
VWFA domain-containing protein.
   
 0.993
A0A267F2N4
VWFA domain-containing protein.
   
 0.993
A0A267GTN3
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.990
A0A267DVA2
Ku domain-containing protein.
   
 0.988
A0A267EBR6
Ku domain-containing protein.
   
 0.988
A0A267GBZ5
Ku domain-containing protein.
   
 0.988
A0A267DFQ4
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.968
A0A267DHC0
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.968
A0A267DWU7
NUC194 domain-containing protein.
   
 0.968
A0A267GUY4
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.968
Your Current Organism:
Macrostomum lignano
NCBI taxonomy Id: 282301
Other names: M. lignano
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