STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1I8GA16Uncharacterized protein. (364 aa)    
Predicted Functional Partners:
A0A267ERB6
Cytochrome b5 heme-binding domain-containing protein.
    
   0.704
A0A267GCI4
Cytochrome b5 heme-binding domain-containing protein.
    
   0.704
A0A267GSW8
Cytochrome b5 heme-binding domain-containing protein.
    
   0.704
A0A267DH31
5'-3' exoribonuclease 1.
    
 
 0.654
A0A267FA13
5'-3' exoribonuclease 1.
    
 
 0.654
A0A267GWV6
SH3_12 domain-containing protein.
    
 
 0.654
A0A267DUQ8
Trehalase.
   
 
 0.590
A0A267GG88
Trehalase.
   
 
 0.590
A0A1I8IM45
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
  
 0.562
A0A267FMI6
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
   
  
 0.528
Your Current Organism:
Macrostomum lignano
NCBI taxonomy Id: 282301
Other names: M. lignano
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