STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1I8GPN040S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (135 aa)    
Predicted Functional Partners:
A0A1I8G8P6
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 0.999
A0A1I8G9B9
Uncharacterized protein.
   
 0.999
A0A1I8GEH2
Uncharacterized protein.
   
 0.999
A0A1I8GHI6
Uncharacterized protein.
   
  0.999
A0A1I8GJQ0
Ribos_L4_asso_C domain-containing protein.
   
 0.999
A0A1I8GQB5
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.999
A0A1I8GSQ6
40S ribosomal protein S27.
   
 0.999
A0A1I8GU56
Uncharacterized protein.
    
 
 0.999
A0A1I8GVC0
40S ribosomal protein S27.
   
 0.999
A0A1I8GVS2
Uncharacterized protein.
   
 0.999
Your Current Organism:
Macrostomum lignano
NCBI taxonomy Id: 282301
Other names: M. lignano
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