A0A1I8HEH6 protein (Macrostomum lignano) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1I8HEH6

Exonuclease domain-containing protein. (311 aa)

Predicted Functional Partners:

A0A267GTN3

0.951

A0A267DWH0

0.848

A0A267ENS1

0.848

A0A267G3H8

0.848

A0A267GCP6

0.848

A0A267EH59

0.822

A0A267GC01

0.822

A0A1I8HM26

0.782

A0A267DU97

0.782

A0A267DXT0

0.782

Your Current Organism:

Macrostomum lignano

NCBI taxonomy Id: 282301
Other names: M. lignano

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1I8HEH6	A0A1I8HM26	Exonuclease domain-containing protein.	Ribosomal_L30 domain-containing protein.	0.782
A0A1I8HEH6	A0A267DU97	Exonuclease domain-containing protein.	Ribosomal_L30 domain-containing protein.	0.782
A0A1I8HEH6	A0A267DWH0	Exonuclease domain-containing protein.	Protein kinase domain-containing protein.	0.848
A0A1I8HEH6	A0A267DXT0	Exonuclease domain-containing protein.	Uncharacterized protein.	0.782
A0A1I8HEH6	A0A267EH59	Exonuclease domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.822
A0A1I8HEH6	A0A267ENS1	Exonuclease domain-containing protein.	Protein kinase domain-containing protein.	0.848
A0A1I8HEH6	A0A267G3H8	Exonuclease domain-containing protein.	Pan3_PK domain-containing protein.	0.848
A0A1I8HEH6	A0A267GC01	Exonuclease domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.822
A0A1I8HEH6	A0A267GCP6	Exonuclease domain-containing protein.	Pan3_PK domain-containing protein.	0.848
A0A1I8HEH6	A0A267GTN3	Exonuclease domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.951
A0A1I8HM26	A0A1I8HEH6	Ribosomal_L30 domain-containing protein.	Exonuclease domain-containing protein.	0.782
A0A1I8HM26	A0A267EH59	Ribosomal_L30 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.921
A0A1I8HM26	A0A267GC01	Ribosomal_L30 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.921
A0A267DU97	A0A1I8HEH6	Ribosomal_L30 domain-containing protein.	Exonuclease domain-containing protein.	0.782
A0A267DU97	A0A267EH59	Ribosomal_L30 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.921
A0A267DU97	A0A267GC01	Ribosomal_L30 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.921
A0A267DWH0	A0A1I8HEH6	Protein kinase domain-containing protein.	Exonuclease domain-containing protein.	0.848
A0A267DXT0	A0A1I8HEH6	Uncharacterized protein.	Exonuclease domain-containing protein.	0.782
A0A267DXT0	A0A267EH59	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.921
A0A267DXT0	A0A267GC01	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.921