A0A267DLA6 protein (Macrostomum lignano) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A267DLA6

Uncharacterized protein. (242 aa)

Predicted Functional Partners:

A0A267E791

0.855

A0A267E7A1

0.855

A0A1I8J808

0.743

A0A267H299

0.724

A0A1I8HCQ4

0.642

A0A267G0P7

0.642

A0A267DSG6

0.616

A0A267GFL0

0.616

A0A267G2U4

0.599

A0A267GRC8

0.599

Your Current Organism:

Macrostomum lignano

NCBI taxonomy Id: 282301
Other names: M. lignano

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1I8HCQ4	A0A1I8J808	EGF-like domain-containing protein.	LRAT domain-containing protein.	0.852
A0A1I8HCQ4	A0A267DLA6	EGF-like domain-containing protein.	Uncharacterized protein.	0.642
A0A1I8HCQ4	A0A267E791	EGF-like domain-containing protein.	Phospholipase A2.	0.943
A0A1I8HCQ4	A0A267E7A1	EGF-like domain-containing protein.	PLA2c domain-containing protein.	0.945
A0A1I8HCQ4	A0A267H299	EGF-like domain-containing protein.	Uncharacterized protein.	0.867
A0A1I8J808	A0A1I8HCQ4	LRAT domain-containing protein.	EGF-like domain-containing protein.	0.852
A0A1I8J808	A0A267DLA6	LRAT domain-containing protein.	Uncharacterized protein.	0.743
A0A1I8J808	A0A267DSG6	LRAT domain-containing protein.	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	0.858
A0A1I8J808	A0A267E791	LRAT domain-containing protein.	Phospholipase A2.	0.871
A0A1I8J808	A0A267E7A1	LRAT domain-containing protein.	PLA2c domain-containing protein.	0.871
A0A1I8J808	A0A267G0P7	LRAT domain-containing protein.	EGF-like domain-containing protein.	0.852
A0A1I8J808	A0A267G2U4	LRAT domain-containing protein.	PlsC domain-containing protein.	0.654
A0A1I8J808	A0A267GFL0	LRAT domain-containing protein.	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	0.858
A0A1I8J808	A0A267GRC8	LRAT domain-containing protein.	PlsC domain-containing protein.	0.654
A0A267DLA6	A0A1I8HCQ4	Uncharacterized protein.	EGF-like domain-containing protein.	0.642
A0A267DLA6	A0A1I8J808	Uncharacterized protein.	LRAT domain-containing protein.	0.743
A0A267DLA6	A0A267DSG6	Uncharacterized protein.	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	0.616
A0A267DLA6	A0A267E791	Uncharacterized protein.	Phospholipase A2.	0.855
A0A267DLA6	A0A267E7A1	Uncharacterized protein.	PLA2c domain-containing protein.	0.855
A0A267DLA6	A0A267G0P7	Uncharacterized protein.	EGF-like domain-containing protein.	0.642