STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A267E1D3Uncharacterized protein. (4022 aa)    
Predicted Functional Partners:
A0A267F5U2
WD_REPEATS_REGION domain-containing protein.
   
 0.961
A0A267G1N8
WD_REPEATS_REGION domain-containing protein.
    
 0.952
A0A267G5H3
WD_REPEATS_REGION domain-containing protein.
    
 0.952
A0A1I8GCL2
B30.2/SPRY domain-containing protein.
    
 0.918
A0A1I8HIF6
B30.2/SPRY domain-containing protein.
    
 0.918
A0A1I8HZG0
B30.2/SPRY domain-containing protein.
    
 0.918
A0A267DMZ5
PHD-type domain-containing protein.
   
 0.910
A0A267DQU9
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.899
A0A267FZU4
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.890
A0A267DS03
SET domain-containing protein.
   
 
 0.836
Your Current Organism:
Macrostomum lignano
NCBI taxonomy Id: 282301
Other names: M. lignano
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.