STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A267E8U9SURF6 domain-containing protein. (400 aa)    
Predicted Functional Partners:
A0A267EXH2
Ribosomal_L28e domain-containing protein.
   
   0.992
A0A267DL98
RRM domain-containing protein.
   
 
 0.991
A0A267FXZ8
Brix domain-containing protein.
   
 
 0.983
A0A267H6T5
Brix domain-containing protein.
   
 
 0.983
A0A267DNH5
Brix domain-containing protein.
   
 
 0.977
A0A267FR45
Brix domain-containing protein.
   
 
 0.977
A0A267EU67
Uncharacterized protein.
   
 
 0.976
A0A267G4C0
Uncharacterized protein.
   
 
 0.976
A0A267DFG7
NOG1_N domain-containing protein.
   
 
 0.973
A0A267EHU4
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.973
Your Current Organism:
Macrostomum lignano
NCBI taxonomy Id: 282301
Other names: M. lignano
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.