STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A267FVD5HMG box domain-containing protein. (455 aa)    
Predicted Functional Partners:
A0A267FM00
NR LBD domain-containing protein.
    
 0.699
A0A267FXN3
NR LBD domain-containing protein.
    
 0.699
A0A267E8J1
HMG box domain-containing protein.
  
 
0.673
A0A267E889
HMG box domain-containing protein.
  
 
0.671
A0A267DZY1
POU domain protein.
   
 0.666
A0A267EMM7
POU domain protein.
   
 0.666
A0A267G996
POU domain protein.
   
 0.666
A0A1I8GL97
Uncharacterized protein.
    
 0.658
A0A267DGG2
Uncharacterized protein.
    
 0.658
A0A267DPN0
Uncharacterized protein.
    
 0.658
Your Current Organism:
Macrostomum lignano
NCBI taxonomy Id: 282301
Other names: M. lignano
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