STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A267FX80SLBP_RNA_bind domain-containing protein. (320 aa)    
Predicted Functional Partners:
A0A267DWX5
Uncharacterized protein.
   
 
  0.913
A0A267FS87
Exonuclease domain-containing protein.
   
 
 0.823
A0A267H522
Exonuclease domain-containing protein.
   
 
 0.823
A0A267DLR8
MIF4G domain-containing protein.
   
 0.805
A0A267GV16
MIF4G domain-containing protein.
   
 0.805
A0A267F4T9
Uncharacterized protein.
   
 
  0.783
A0A267GBJ4
Uncharacterized protein.
   
 
  0.783
A0A267E392
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 
 0.732
A0A267EV24
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 
 0.732
A0A267FS18
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 
 0.732
Your Current Organism:
Macrostomum lignano
NCBI taxonomy Id: 282301
Other names: M. lignano
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