STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A267GWE3Uncharacterized protein. (500 aa)    
Predicted Functional Partners:
A0A1I8HJT3
Uncharacterized protein.
   
 
 0.994
A0A267FTC6
Uncharacterized protein.
   
 
 0.982
A0A267FFV6
PWI domain-containing protein.
   
 
 0.978
A0A267GPQ7
PWI domain-containing protein.
   
 
 0.978
A0A267DGX2
Matrin-type domain-containing protein.
   
 
 0.969
A0A267FNC3
U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family.
   
 
 0.969
A0A267G0F0
zf-U1 domain-containing protein.
   
 
 0.969
A0A267G721
Uncharacterized protein.
    
 
 0.969
A0A267G754
Uncharacterized protein.
    
 
 0.969
A0A267G766
Uncharacterized protein.
    
 
 0.969
Your Current Organism:
Macrostomum lignano
NCBI taxonomy Id: 282301
Other names: M. lignano
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.