STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC31830.1Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. (300 aa)    
Predicted Functional Partners:
SDC31864.1
PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
 
 0.999
SDC31807.1
Transcriptional regulator, DeoR family.
 
  
 0.869
rpiB
Ribose-5-phosphate isomerase.
  
 
 0.794
SDC31755.1
PTS system IIA component, Fru family.
 
 
 0.765
SDC63404.1
Glycosyl hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
  
  
 0.713
SDB96930.1
Benzil reductase ((S)-benzoin forming).
   
 
 0.681
SDC21137.1
3-oxoacyl-[acyl-carrier-protein] reductase.
  
 
 0.681
SDC36483.1
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.681
SDC34871.1
Protein of unknown function.
   
    0.663
SDC31721.1
Phosphotransferase system, enzyme I, PtsI; Belongs to the PEP-utilizing enzyme family.
  
  
 0.654
Your Current Organism:
Geotoga petraea
NCBI taxonomy Id: 28234
Other names: ATCC 51226, G. petraea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.