STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC34700.1DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family. (194 aa)    
Predicted Functional Partners:
SDC34665.1
Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family.
       0.737
SDC71672.1
Undecaprenyl-diphosphatase.
  
  
 0.678
SDC92639.1
Exodeoxyribonuclease-3.
    
 0.640
SDC34734.1
ABC-2 type transport system permease protein.
       0.497
SDC34768.1
ABC-2 type transport system ATP-binding protein.
       0.497
Your Current Organism:
Geotoga petraea
NCBI taxonomy Id: 28234
Other names: ATCC 51226, G. petraea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.