Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDC01777.1 | speE | SAMN04488588_0254 | SAMN04488588_1515 | 5-methylthioadenosine/S-adenosylhomocysteine deaminase. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.942 |
| SDC08602.1 | nadE | SAMN04488588_0450 | SAMN04488588_0372 | Predicted amidohydrolase. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.856 |
| SDC08602.1 | speE | SAMN04488588_0450 | SAMN04488588_1515 | Predicted amidohydrolase. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.502 |
| SDC08602.1 | speH | SAMN04488588_0450 | SAMN04488588_1514 | Predicted amidohydrolase. | Adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.471 |
| SDC36700.1 | SDC60153.1 | SAMN04488588_0961 | SAMN04488588_1419 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Acetylornithine/succinyldiaminopimelate/putresci ne aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.464 |
| SDC36700.1 | lysA | SAMN04488588_0961 | SAMN04488588_1424 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Diaminopimelate decarboxylase. | 0.505 |
| SDC36700.1 | nadE | SAMN04488588_0961 | SAMN04488588_0372 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.503 |
| SDC36700.1 | speE | SAMN04488588_0961 | SAMN04488588_1515 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.953 |
| SDC36700.1 | speH | SAMN04488588_0961 | SAMN04488588_1514 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.463 |
| SDC60153.1 | SDC36700.1 | SAMN04488588_1419 | SAMN04488588_0961 | Acetylornithine/succinyldiaminopimelate/putresci ne aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.464 |
| SDC60153.1 | lysA | SAMN04488588_1419 | SAMN04488588_1424 | Acetylornithine/succinyldiaminopimelate/putresci ne aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Diaminopimelate decarboxylase. | 0.906 |
| SDC60153.1 | nadE | SAMN04488588_1419 | SAMN04488588_0372 | Acetylornithine/succinyldiaminopimelate/putresci ne aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.526 |
| SDC60153.1 | speE | SAMN04488588_1419 | SAMN04488588_1515 | Acetylornithine/succinyldiaminopimelate/putresci ne aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.514 |
| SDC60153.1 | speH | SAMN04488588_1419 | SAMN04488588_1514 | Acetylornithine/succinyldiaminopimelate/putresci ne aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.478 |
| SDC63291.1 | nadE | SAMN04488588_1513 | SAMN04488588_0372 | Cupin domain-containing protein. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.843 |
| SDC63291.1 | speE | SAMN04488588_1513 | SAMN04488588_1515 | Cupin domain-containing protein. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.791 |
| SDC63291.1 | speH | SAMN04488588_1513 | SAMN04488588_1514 | Cupin domain-containing protein. | Adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.845 |
| fliM | metK | SAMN04488588_0437 | SAMN04488588_0763 | Flagellar motor switch protein FliM. | Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.624 |
| fliM | speE | SAMN04488588_0437 | SAMN04488588_1515 | Flagellar motor switch protein FliM. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.748 |
| lysA | SDC36700.1 | SAMN04488588_1424 | SAMN04488588_0961 | Diaminopimelate decarboxylase. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.505 |
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