STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC66907.1Glyoxylase, beta-lactamase superfamily II. (295 aa)    
Predicted Functional Partners:
SDC43374.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.985
SDC66942.1
Peroxiredoxin.
  
    0.499
SDC66987.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
       0.485
SDC67025.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
       0.470
SDC37821.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
   
 0.468
SDC68321.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
   
 0.468
Your Current Organism:
Geotoga petraea
NCBI taxonomy Id: 28234
Other names: ATCC 51226, G. petraea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.