STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC80502.1Type I phosphodiesterase / nucleotide pyrophosphatase. (415 aa)    
Predicted Functional Partners:
pgk
Phosphoglycerate kinase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
     
 0.813
SDC80535.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.773
SDC77933.1
Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 0.459
SDC18095.1
Nicotinate phosphoribosyltransferase; Belongs to the NAPRTase family.
  
  
  0.445
SDC36204.1
3-hydroxybutyryl-CoA dehydratase.
 
  
  0.438
SDC68887.1
ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
  
 
 0.410
SDC58062.1
Glutaredoxin-like domain protein.
  
     0.404
SDC17041.1
Maltodextrin phosphorylase.
     
 0.402
Your Current Organism:
Geotoga petraea
NCBI taxonomy Id: 28234
Other names: ATCC 51226, G. petraea
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