Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AOM01038.1 | AOM01254.1 | BFX80_06660 | BFX80_08035 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.532 |
AOM01038.1 | AOM02423.1 | BFX80_06660 | BFX80_15505 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Monovalent cation/H+ antiporter subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.491 |
AOM01038.1 | cysN-2 | BFX80_06660 | BFX80_06675 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.569 |
AOM01038.1 | cysQ-2 | BFX80_06660 | BFX80_06665 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family. | 0.657 |
AOM01254.1 | AOM01038.1 | BFX80_08035 | BFX80_06660 | Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.532 |
AOM02423.1 | AOM01038.1 | BFX80_15505 | BFX80_06660 | Monovalent cation/H+ antiporter subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.491 |
cysN-2 | AOM01038.1 | BFX80_06675 | BFX80_06660 | Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.569 |
cysN-2 | cysQ-2 | BFX80_06675 | BFX80_06665 | Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family. | 0.974 |
cysQ-2 | AOM01038.1 | BFX80_06665 | BFX80_06660 | 3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.657 |
cysQ-2 | cysN-2 | BFX80_06665 | BFX80_06675 | 3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family. | Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.974 |