Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AOM00981.1 | AOM02098.1 | BFX80_06265 | BFX80_13355 | 5,10-methylenetetrahydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methylenetetrahydrofolate reductase family. | Homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.814 |
AOM00981.1 | metH | BFX80_06265 | BFX80_08905 | 5,10-methylenetetrahydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methylenetetrahydrofolate reductase family. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.994 |
AOM02097.1 | AOM02098.1 | BFX80_13350 | BFX80_13355 | Zinc chelation protein SecC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.518 |
AOM02098.1 | AOM00981.1 | BFX80_13355 | BFX80_06265 | Homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5,10-methylenetetrahydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methylenetetrahydrofolate reductase family. | 0.814 |
AOM02098.1 | AOM02097.1 | BFX80_13355 | BFX80_13350 | Homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Zinc chelation protein SecC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.518 |
AOM02098.1 | metH | BFX80_13355 | BFX80_08905 | Homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.494 |
metH | AOM00981.1 | BFX80_08905 | BFX80_06265 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 5,10-methylenetetrahydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methylenetetrahydrofolate reductase family. | 0.994 |
metH | AOM02098.1 | BFX80_08905 | BFX80_13355 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.494 |