STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900016235_00341Unannotated protein. (325 aa)    
Predicted Functional Partners:
GCA_900016235_00297
Unannotated protein.
   
 0.740
GCA_900016235_00339
Unannotated protein.
  
 
  0.635
GCA_900016235_02053
Unannotated protein.
  
 
 0.628
GCA_900016235_00260
Unannotated protein.
   
 
 0.575
GCA_900016235_00338
Unannotated protein.
  
 
  0.552
GCA_900016235_00340
Unannotated protein.
       0.542
GCA_900016235_00021
Unannotated protein.
  
  0.522
GCA_900016235_00091
Unannotated protein.
  
  0.522
GCA_900016235_01781
Unannotated protein.
 
  
  0.449
GCA_900016235_02391
Unannotated protein.
  
  
  0.444
Your Current Organism:
Psychrobacter cibarius
NCBI taxonomy Id: 282669
Other names: DSM 16327, KCTC 12256, P. cibarius, Psychrobacter cibarius Jung et al. 2005, strain JG-219
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.