STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900016235_01697Unannotated protein. (205 aa)    
Predicted Functional Partners:
GCA_900016235_01696
Unannotated protein.
 
 0.993
GCA_900016235_00281
Unannotated protein.
  
 0.801
GCA_900016235_00297
Unannotated protein.
     
 0.758
GCA_900016235_01162
Unannotated protein.
    
 0.693
GCA_900016235_02303
Unannotated protein.
  
  
 0.664
GCA_900016235_01483
Unannotated protein.
  
 
  0.650
GCA_900016235_01529
Unannotated protein.
    
 0.622
GCA_900016235_00240
Unannotated protein.
  
 
 0.617
GCA_900016235_00501
Unannotated protein.
    
  0.612
GCA_900016235_01183
Unannotated protein.
    
  0.612
Your Current Organism:
Psychrobacter cibarius
NCBI taxonomy Id: 282669
Other names: DSM 16327, KCTC 12256, P. cibarius, Psychrobacter cibarius Jung et al. 2005, strain JG-219
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.