STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900016235_02593Unannotated protein. (210 aa)    
Predicted Functional Partners:
GCA_900016235_01403
Unannotated protein.
    
  0.793
GCA_900016235_02591
Unannotated protein.
       0.773
GCA_900016235_02592
Unannotated protein.
       0.773
GCA_900016235_01529
Unannotated protein.
  
 
  0.696
GCA_900016235_01321
Unannotated protein.
  
 
  0.600
GCA_900016235_01574
Unannotated protein.
  
 
 0.585
GCA_900016235_01183
Unannotated protein.
    
  0.569
GCA_900016235_00915
Unannotated protein.
   
 
  0.542
GCA_900016235_02467
Unannotated protein.
  
    0.466
GCA_900016235_02594
Unannotated protein.
       0.464
Your Current Organism:
Psychrobacter cibarius
NCBI taxonomy Id: 282669
Other names: DSM 16327, KCTC 12256, P. cibarius, Psychrobacter cibarius Jung et al. 2005, strain JG-219
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.