Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ARM74707.1Catechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)    
Predicted Functional Partners:
ARM76333.1
NADH-quinone oxidoreductase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.779
ARM74863.1
5,6-dimethylbenzimidazole synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.685
ARM75519.1
4-hydroxyphenylacetate 3-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.665
ARM77153.1
NADH dehydrogenase subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the complex I 49 kDa subunit family.
  
  
 0.662
ARM75320.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.653
ARM74708.1
Acetoacetate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.636
ARM75380.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.604
ARM75381.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
ARM74709.1
Acetoacetate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.565
ARM75159.1
Succinate dehydrogenase flavoprotein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.530
Your Current Organism:
Acidianus manzaensis
NCBI taxonomy Id: 282676
Other names: A. manzaensis, NBRC 100595, strain NA-1
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