Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ARM75059.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)    
Predicted Functional Partners:
ARM75057.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.895
ARM75058.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.895
ARM75056.1
Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.879
ARM75060.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyruvate kinase family.
       0.786
ARM75053.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.616
ARM75054.1
Glycogen synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.616
ARM75055.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.586
ARM75052.1
Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.467
ARM75051.1
Glycogen debranching protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.466
ARM77033.1
Glucan 1,3-alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.466
Your Current Organism:
Acidianus manzaensis
NCBI taxonomy Id: 282676
Other names: A. manzaensis, NBRC 100595, strain NA-1
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