Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ARM75078.1Sulfate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)    
Predicted Functional Partners:
ARM74890.1
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.618
ARM74612.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.600
ARM75464.1
Cationic amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.557
ARM75578.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.527
ARM76169.1
Maleate cis-trans isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.506
ARM74894.1
Sulfur reductase DrsE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.500
ARM75022.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.497
ARM75079.1
L-aspartate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.483
ARM75080.1
Coenzyme A pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.483
ARM76667.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.457
Your Current Organism:
Acidianus manzaensis
NCBI taxonomy Id: 282676
Other names: A. manzaensis, NBRC 100595, strain NA-1
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