Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ARM75377.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)    
Predicted Functional Partners:
ARM75376.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.782
ARM75378.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.777
ARM75379.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.588
ARM74820.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.496
ARM74968.1
Leucyl aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.496
ARM75423.1
Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.
   
 0.465
ARM75780.1
Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.
   
 0.465
ARM75659.1
Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.447
ARM75846.1
Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.438
ARM75382.1
Glutamate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family.
     
 0.431
Your Current Organism:
Acidianus manzaensis
NCBI taxonomy Id: 282676
Other names: A. manzaensis, NBRC 100595, strain NA-1
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