ARM75572.1 protein (Acidianus manzaensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ARM75572.1

Heterodisulfide reductase subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)

Predicted Functional Partners:

ARM75571.1

0.984

ARM74717.1

0.645

ARM75298.1

0.625

ARM74716.1

0.594

gap

0.490

ARM74693.1

0.480

ARM75602.1

0.429

ARM76882.1

0.429

fni

0.420

ARM76927.1

0.401

Your Current Organism:

Acidianus manzaensis

NCBI taxonomy Id: 282676
Other names: A. manzaensis, NBRC 100595, strain NA-1

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARM74693.1	ARM74717.1	B6F84_00745	B6F84_00880	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
ARM74693.1	ARM75572.1	B6F84_00745	B6F84_05660	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heterodisulfide reductase subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
ARM74693.1	ARM75602.1	B6F84_00745	B6F84_05820	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.637
ARM74693.1	ARM76882.1	B6F84_00745	B6F84_13200	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.578
ARM74693.1	ARM76927.1	B6F84_00745	B6F84_13470	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.578
ARM74716.1	ARM74717.1	B6F84_00875	B6F84_00880	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ARM74716.1	ARM75298.1	B6F84_00875	B6F84_04125	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.404
ARM74716.1	ARM75572.1	B6F84_00875	B6F84_05660	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heterodisulfide reductase subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.594
ARM74716.1	ARM75602.1	B6F84_00875	B6F84_05820	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.629
ARM74716.1	ARM76882.1	B6F84_00875	B6F84_13200	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.578
ARM74716.1	ARM76927.1	B6F84_00875	B6F84_13470	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.578
ARM74717.1	ARM74693.1	B6F84_00880	B6F84_00745	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
ARM74717.1	ARM74716.1	B6F84_00880	B6F84_00875	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ARM74717.1	ARM75298.1	B6F84_00880	B6F84_04125	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.491
ARM74717.1	ARM75572.1	B6F84_00880	B6F84_05660	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heterodisulfide reductase subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.645
ARM74717.1	ARM75602.1	B6F84_00880	B6F84_05820	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.654
ARM74717.1	ARM76882.1	B6F84_00880	B6F84_13200	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.607
ARM74717.1	ARM76927.1	B6F84_00880	B6F84_13470	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.607
ARM75298.1	ARM74716.1	B6F84_04125	B6F84_00875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.404
ARM75298.1	ARM74717.1	B6F84_04125	B6F84_00880	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.491