Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ARM75662.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)    
Predicted Functional Partners:
ARM75663.1
uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.955
ARM75664.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
ARM76446.1
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.777
ARM74622.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.763
ARM75661.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.666
mre11
Metallophosphoesterase; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single-stranded endonuclease activity. Belongs to the MRE11/RAD32 family.
  
 
 0.653
ARM75675.1
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.576
ARM76997.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.557
ARM74694.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.557
ARM75533.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.557
Your Current Organism:
Acidianus manzaensis
NCBI taxonomy Id: 282676
Other names: A. manzaensis, NBRC 100595, strain NA-1
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