STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARM75979.1CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)    
Predicted Functional Partners:
ARM74921.1
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.814
ARM76587.1
ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.814
ARM75827.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.813
ARM76914.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.758
ARM74875.1
KaiC domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.737
nfi
Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.
      
 0.718
ARM75978.1
Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.712
ARM75977.1
AMMECR1 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.626
ARM75976.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.602
ARM75982.1
Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.569
Your Current Organism:
Acidianus manzaensis
NCBI taxonomy Id: 282676
Other names: A. manzaensis, NBRC 100595, strain NA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.