Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ARM76053.1Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)    
Predicted Functional Partners:
ARM74622.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.961
ARM76407.1
GTPase; Homodimeric GPN-loop GTPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.956
ARM76052.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.952
ARM75675.1
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.939
ARM75982.1
Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.882
ARM76627.1
MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.882
ARM75081.1
TATA box-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.876
ARM74876.1
Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.874
ARM76054.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.868
rpl3
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
 
  0.843
Your Current Organism:
Acidianus manzaensis
NCBI taxonomy Id: 282676
Other names: A. manzaensis, NBRC 100595, strain NA-1
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