ARM76429.1 protein (Acidianus manzaensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ARM76429.1

Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (98 aa)

Predicted Functional Partners:

ARM76428.1

0.664

ARM76426.1

0.563

ARM76427.1

0.563

ARM76430.1

0.535

ARM76431.1

0.446

Your Current Organism:

Acidianus manzaensis

NCBI taxonomy Id: 282676
Other names: A. manzaensis, NBRC 100595, strain NA-1

Export your current network:

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same PNG format, but at higher resolution

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARM76426.1	ARM76427.1	B6F84_10620	B6F84_10625	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
ARM76426.1	ARM76428.1	B6F84_10620	B6F84_10630	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.651
ARM76426.1	ARM76429.1	B6F84_10620	B6F84_10635	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.563
ARM76426.1	ARM76430.1	B6F84_10620	B6F84_10640	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.403
ARM76427.1	ARM76426.1	B6F84_10625	B6F84_10620	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
ARM76427.1	ARM76428.1	B6F84_10625	B6F84_10630	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.651
ARM76427.1	ARM76429.1	B6F84_10625	B6F84_10635	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.563
ARM76427.1	ARM76430.1	B6F84_10625	B6F84_10640	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.403
ARM76428.1	ARM76426.1	B6F84_10630	B6F84_10620	Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.651
ARM76428.1	ARM76427.1	B6F84_10630	B6F84_10625	Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.651
ARM76428.1	ARM76429.1	B6F84_10630	B6F84_10635	Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
ARM76428.1	ARM76430.1	B6F84_10630	B6F84_10640	Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.467
ARM76429.1	ARM76426.1	B6F84_10635	B6F84_10620	Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.563
ARM76429.1	ARM76427.1	B6F84_10635	B6F84_10625	Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.563
ARM76429.1	ARM76428.1	B6F84_10635	B6F84_10630	Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
ARM76429.1	ARM76430.1	B6F84_10635	B6F84_10640	Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.535
ARM76429.1	ARM76431.1	B6F84_10635	B6F84_10645	Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.446
ARM76430.1	ARM76426.1	B6F84_10640	B6F84_10620	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.403
ARM76430.1	ARM76427.1	B6F84_10640	B6F84_10625	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.403
ARM76430.1	ARM76428.1	B6F84_10640	B6F84_10630	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.467