Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ARM76500.1Fe-S cluster assembly protein SufB; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)    
Predicted Functional Partners:
ARM76501.1
Fe-S cluster assembly ATPase SufC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
ARM76499.1
Fe-S cluster assembly protein SufD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.995
ARM75033.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.924
ARM76502.1
AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.670
ARM76498.1
CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.590
gcvH
Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
     
 0.493
ARM77144.1
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.455
ARM76503.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.452
ARM76504.1
Carboxylate--amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.452
ARM76506.1
Glycine cleavage system protein T; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.444
Your Current Organism:
Acidianus manzaensis
NCBI taxonomy Id: 282676
Other names: A. manzaensis, NBRC 100595, strain NA-1
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