Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ARM76587.1ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (920 aa)    
Predicted Functional Partners:
ARM75979.1
CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.814
ARM76588.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.801
ARM77179.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.785
ARM74875.1
KaiC domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.778
ARM76914.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.763
nfi
Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.
      
 0.718
ARM77177.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.692
top6B
DNA topoisomerase VI subunit B; Relaxes both positive and negative superturns and exhibits a strong decatenase activity.
   
   0.498
top6A
DNA topoisomerase VI; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family.
 
     0.482
ARM75982.1
Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.459
Your Current Organism:
Acidianus manzaensis
NCBI taxonomy Id: 282676
Other names: A. manzaensis, NBRC 100595, strain NA-1
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