ARM76691.1 protein (Acidianus manzaensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ARM76691.1

Sulfur oxidation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)

Predicted Functional Partners:

ARM75236.1

0.958

B6F84_05835

0.958

ARM75676.1

0.958

ARM74939.1

0.946

ARM76164.1

0.946

ARM76688.1

0.946

ARM77052.1

0.923

ARM74667.1

0.900

ARM75149.1

0.900

ARM75004.1

0.674

Your Current Organism:

Acidianus manzaensis

NCBI taxonomy Id: 282676
Other names: A. manzaensis, NBRC 100595, strain NA-1

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARM74667.1	ARM74939.1	B6F84_00585	B6F84_02115	Selenium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ARM74667.1	ARM75149.1	B6F84_00585	B6F84_03270	Selenium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ARM74667.1	ARM75236.1	B6F84_00585	B6F84_03775	Selenium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ARM74667.1	ARM75676.1	B6F84_00585	B6F84_06235	Selenium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ARM74667.1	ARM76164.1	B6F84_00585	B6F84_09120	Selenium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ARM74667.1	ARM76688.1	B6F84_00585	B6F84_12150	Selenium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ARM74667.1	ARM76691.1	B6F84_00585	B6F84_12165	Selenium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfur oxidation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ARM74667.1	B6F84_05835	B6F84_00585	B6F84_05835	Selenium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ARM74939.1	ARM74667.1	B6F84_02115	B6F84_00585	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Selenium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ARM74939.1	ARM75149.1	B6F84_02115	B6F84_03270	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
ARM74939.1	ARM76688.1	B6F84_02115	B6F84_12150	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.736
ARM74939.1	ARM76691.1	B6F84_02115	B6F84_12165	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfur oxidation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
ARM75004.1	ARM76691.1	B6F84_02480	B6F84_12165	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfur oxidation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.674
ARM75149.1	ARM74667.1	B6F84_03270	B6F84_00585	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Selenium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ARM75149.1	ARM74939.1	B6F84_03270	B6F84_02115	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
ARM75149.1	ARM75236.1	B6F84_03270	B6F84_03775	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
ARM75149.1	ARM75676.1	B6F84_03270	B6F84_06235	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
ARM75149.1	ARM76164.1	B6F84_03270	B6F84_09120	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
ARM75149.1	ARM76688.1	B6F84_03270	B6F84_12150	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
ARM75149.1	ARM76691.1	B6F84_03270	B6F84_12165	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfur oxidation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900