Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARM76698.1Acylaminoacyl-peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (583 aa)    
Predicted Functional Partners:
ARM76699.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.663
ARM76509.1
Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.582
ARM76700.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.526
ARM75596.1
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.407
ARM75534.1
Carboxypeptidase M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.
  
    0.405
Your Current Organism:
Acidianus manzaensis
NCBI taxonomy Id: 282676
Other names: A. manzaensis, NBRC 100595, strain NA-1
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