Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARM77196.1Acid phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)    
Predicted Functional Partners:
ARM76718.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ARM76719.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
ARM76717.1
Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.739
ARM76715.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.701
ARM76716.1
Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.701
ARM76720.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.604
ARM75568.1
Peptidase S53; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.570
ARM76852.1
Peptidase S53; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.560
ARM76721.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.514
ARM74981.1
Peptidase S53; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.483
Your Current Organism:
Acidianus manzaensis
NCBI taxonomy Id: 282676
Other names: A. manzaensis, NBRC 100595, strain NA-1
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