Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARM76753.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)    
Predicted Functional Partners:
ARM76754.1
Peptidase U62; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.982
ARM76238.1
Zn-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.774
ARM76752.1
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ARM76237.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.639
ARM75974.1
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.545
ARM76755.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.497
ARM76071.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.444
ARM76706.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.442
ARM75480.1
GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.420
ARM75031.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.415
Your Current Organism:
Acidianus manzaensis
NCBI taxonomy Id: 282676
Other names: A. manzaensis, NBRC 100595, strain NA-1
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