Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARM76783.1 | ARM76784.1 | B6F84_12660 | B6F84_12665 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.471 |
ARM76783.1 | ARM76786.1 | B6F84_12660 | B6F84_12675 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.478 |
ARM76784.1 | ARM76783.1 | B6F84_12665 | B6F84_12660 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | 0.471 |
ARM76784.1 | ARM76785.1 | B6F84_12665 | B6F84_12670 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.517 |
ARM76784.1 | ARM76786.1 | B6F84_12665 | B6F84_12675 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.507 |
ARM76785.1 | ARM76784.1 | B6F84_12670 | B6F84_12665 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.517 |
ARM76785.1 | ARM76786.1 | B6F84_12670 | B6F84_12675 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.825 |
ARM76786.1 | ARM76783.1 | B6F84_12675 | B6F84_12660 | Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | 0.478 |
ARM76786.1 | ARM76784.1 | B6F84_12675 | B6F84_12665 | Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.507 |
ARM76786.1 | ARM76785.1 | B6F84_12675 | B6F84_12670 | Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.825 |
ARM76786.1 | cobQ | B6F84_12675 | B6F84_09420 | Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.410 |
ARM76786.1 | srp54 | B6F84_12675 | B6F84_11570 | Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.429 |
cobQ | ARM76786.1 | B6F84_09420 | B6F84_12675 | Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.410 |
srp54 | ARM76786.1 | B6F84_11570 | B6F84_12675 | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.429 |