Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APG17834.1 | APG17835.1 | A3780_09805 | A3780_09810 | Fusaric acid resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.938 |
APG17834.1 | APG17836.1 | A3780_09805 | A3780_09815 | Fusaric acid resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.857 |
APG17834.1 | slyA | A3780_09805 | A3780_09820 | Fusaric acid resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator SlyA; Transcription regulator that can specifically activate or repress expression of target genes; Belongs to the SlyA family. | 0.524 |
APG17835.1 | APG17834.1 | A3780_09810 | A3780_09805 | Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Fusaric acid resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.938 |
APG17835.1 | APG17836.1 | A3780_09810 | A3780_09815 | Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.809 |
APG17835.1 | slyA | A3780_09810 | A3780_09820 | Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Transcriptional regulator SlyA; Transcription regulator that can specifically activate or repress expression of target genes; Belongs to the SlyA family. | 0.566 |
APG17836.1 | APG17834.1 | A3780_09815 | A3780_09805 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fusaric acid resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.857 |
APG17836.1 | APG17835.1 | A3780_09815 | A3780_09810 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.809 |
APG17836.1 | slyA | A3780_09815 | A3780_09820 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator SlyA; Transcription regulator that can specifically activate or repress expression of target genes; Belongs to the SlyA family. | 0.652 |
slyA | APG17834.1 | A3780_09820 | A3780_09805 | Transcriptional regulator SlyA; Transcription regulator that can specifically activate or repress expression of target genes; Belongs to the SlyA family. | Fusaric acid resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.524 |
slyA | APG17835.1 | A3780_09820 | A3780_09810 | Transcriptional regulator SlyA; Transcription regulator that can specifically activate or repress expression of target genes; Belongs to the SlyA family. | Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.566 |
slyA | APG17836.1 | A3780_09820 | A3780_09815 | Transcriptional regulator SlyA; Transcription regulator that can specifically activate or repress expression of target genes; Belongs to the SlyA family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.652 |