STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG20019.1Presumed portal vertex protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)    
Predicted Functional Partners:
APG20018.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.965
APG20017.1
GPO family capsid scaffolding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.895
APG20015.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.883
APG20016.1
gpN; N protein; structural capsid protein; bacteriophage P2-like virions include a head and a tail; N is the major head protein; the mature capsid contains mainly the processed form of the protein N*, which lacks 31 amino acids at the N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.883
A3780_21520
Phage tail protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.852
APG20009.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.825
APG16967.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.820
APG19292.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.807
APG19290.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.805
APG20010.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.804
Your Current Organism:
Kosakonia radicincitans
NCBI taxonomy Id: 283686
Other names: CCUG 50898, CIP 108468, DSM 16656, Enterobacter radicincitans, Enterobacter radicincitans Kampfer et al. 2005, Enterobacter sp. ICB22, Enterobacter sp. ICB561, Enterobacter sp. ICB565, Enterobacter sp. ICB567, Enterobacter sp. ICB573, K. radicincitans, Kosakonia radicincitans (Kampfer et al. 2005) Brady et al. 2013, LMG 23767, LMG:23767, strain D5/23
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