STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG20357.1Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (201 aa)    
Predicted Functional Partners:
APG20355.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.962
APG20358.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.961
APG21109.1
DNA gyrase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.959
APG20353.1
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.955
APG20354.1
hydroxymyristoyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.955
APG20356.1
4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.955
APG20359.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.955
APG20361.1
3-hydroxy-fatty acyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.955
APG20360.1
Beta-ketoacyl-[acyl-carrier-protein] synthase II; FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.947
APG20363.1
FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.944
Your Current Organism:
Kosakonia radicincitans
NCBI taxonomy Id: 283686
Other names: CCUG 50898, CIP 108468, DSM 16656, Enterobacter radicincitans, Enterobacter radicincitans Kampfer et al. 2005, Enterobacter sp. ICB22, Enterobacter sp. ICB561, Enterobacter sp. ICB565, Enterobacter sp. ICB567, Enterobacter sp. ICB573, K. radicincitans, Kosakonia radicincitans (Kampfer et al. 2005) Brady et al. 2013, LMG 23767, LMG:23767, strain D5/23
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.