ALQ06642.1 protein (Pseudoalteromonas sp. Bsw20308)

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second shell of interactors

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

ALQ06642.1

RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)

Predicted Functional Partners:

ALQ07370.1

0.910

ALQ07712.1

0.908

ALQ08778.1

0.844

ALQ09618.1

0.822

ALQ07163.1

0.814

rplD

0.796

ALQ06618.1

0.787

ALQ06617.1

0.784

ALQ06857.1

0.774

ALQ06756.1

0.760

Your Current Organism:

Pseudoalteromonas sp. Bsw20308

NCBI taxonomy Id: 283699
Other names: P. sp. Bsw20308

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALQ06617.1	ALQ06618.1	D172_000260	D172_000265	ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ALQ06617.1	ALQ06642.1	D172_000260	D172_000425	ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
ALQ06617.1	ALQ06756.1	D172_000260	D172_001070	ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.875
ALQ06617.1	ALQ06857.1	D172_000260	D172_001610	ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.852
ALQ06617.1	ALQ07163.1	D172_000260	D172_003280	ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.795
ALQ06617.1	ALQ07370.1	D172_000260	D172_004395	ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
ALQ06617.1	ALQ07712.1	D172_000260	D172_006290	ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent RNA helicase RhlE; This helicase is not essential cell growth; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
ALQ06617.1	rplD	D172_000260	D172_001045	ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.860
ALQ06618.1	ALQ06617.1	D172_000265	D172_000260	ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ALQ06618.1	ALQ06642.1	D172_000265	D172_000425	ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.787
ALQ06618.1	ALQ06756.1	D172_000265	D172_001070	ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.885
ALQ06618.1	ALQ06857.1	D172_000265	D172_001610	ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.855
ALQ06618.1	ALQ07163.1	D172_000265	D172_003280	ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.754
ALQ06618.1	ALQ07370.1	D172_000265	D172_004395	ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.787
ALQ06618.1	ALQ07712.1	D172_000265	D172_006290	ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent RNA helicase RhlE; This helicase is not essential cell growth; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.787
ALQ06618.1	ALQ08778.1	D172_000265	D172_012395	ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyribonucleotide nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
ALQ06618.1	rplD	D172_000265	D172_001045	ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.769
ALQ06642.1	ALQ06617.1	D172_000425	D172_000260	RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
ALQ06642.1	ALQ06618.1	D172_000425	D172_000265	RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.787
ALQ06642.1	ALQ06756.1	D172_000425	D172_001070	RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760