STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALQ06820.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)    
Predicted Functional Partners:
ALQ07163.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.968
ALQ07162.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.800
ALQ08162.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.765
ALQ08262.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.730
ALQ09099.1
3-deoxy-D-manno-octulosonic acid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.719
ALQ08244.1
Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.716
ALQ09098.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.708
ALQ07869.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.706
ALQ07209.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.694
ALQ09335.1
2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.675
Your Current Organism:
Pseudoalteromonas sp. Bsw20308
NCBI taxonomy Id: 283699
Other names: P. sp. Bsw20308
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.