STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tgtQueuine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)    
Predicted Functional Partners:
ALQ06930.1
S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.990
yajC
Member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.909
ALQ06934.1
Preprotein translocase subunit SecF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.832
secD
Preprotein translocase subunit SecD; Part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.783
queF
Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.734
guaA
GMP synthetase; Contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.710
ALQ08780.1
Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.530
ALQ09126.1
3,4-dihydroxy-2-butanone 4-phosphate synthase; Bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.517
ALQ06935.1
Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.492
ALQ09834.1
Rod shape-determining protein MreC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.491
Your Current Organism:
Pseudoalteromonas sp. Bsw20308
NCBI taxonomy Id: 283699
Other names: P. sp. Bsw20308
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