STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALQ07324.1Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)    
Predicted Functional Partners:
ALQ07325.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.881
ALQ07326.1
DNA polymerase IV; Involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.805
ALQ07163.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.763
ALQ06720.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.680
ALQ07851.1
Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.640
ALQ09569.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.480
ALQ07460.1
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.479
ALQ07675.1
Cyclophilin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.479
ALQ08850.1
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.479
ALQ09823.1
Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.479
Your Current Organism:
Pseudoalteromonas sp. Bsw20308
NCBI taxonomy Id: 283699
Other names: P. sp. Bsw20308
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.