STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALQ07407.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (79 aa)    
Predicted Functional Partners:
ALQ07406.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.821
ALQ07409.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.734
ALQ07410.1
Cell division protein FtsB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.700
ALQ07405.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.697
ALQ07411.1
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.686
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.686
ALQ07413.1
Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.685
ALQ07408.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.664
pcm
protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.657
ALQ07414.1
Stationary phase survival protein SurE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.609
Your Current Organism:
Pseudoalteromonas sp. Bsw20308
NCBI taxonomy Id: 283699
Other names: P. sp. Bsw20308
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.