STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALQ07851.1Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (585 aa)    
Predicted Functional Partners:
ALQ07850.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.967
ALQ09099.1
3-deoxy-D-manno-octulosonic acid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.923
ALQ06900.1
Phosphopeptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.883
fmt
methionyl-tRNA formyltransferase; Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.868
ALQ07852.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.854
ALQ07365.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.837
ALQ07854.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.816
ALQ06720.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.815
ALQ06948.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.800
ALQ08612.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.800
Your Current Organism:
Pseudoalteromonas sp. Bsw20308
NCBI taxonomy Id: 283699
Other names: P. sp. Bsw20308
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.