STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALQ08530.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)    
Predicted Functional Partners:
ALQ08529.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.770
ALQ08681.1
Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.577
ALQ07167.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.576
ALQ09741.1
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.576
ALQ08538.1
RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.576
ALQ07163.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.546
ALQ06670.1
Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.449
ALQ06832.1
Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.449
ALQ07242.1
Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.449
ALQ08511.1
Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.449
Your Current Organism:
Pseudoalteromonas sp. Bsw20308
NCBI taxonomy Id: 283699
Other names: P. sp. Bsw20308
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.