STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALQ08546.1Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (640 aa)    
Predicted Functional Partners:
ALQ08547.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.995
ALQ08548.1
SpoVR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.991
ALQ09823.1
Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.783
ALQ08545.1
Superoxide dismutase; SodB; iron binding; present under aerobic and anaerobic conditions; destroys free radicals; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.722
ALQ08549.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.696
ALQ07048.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.544
ALQ08610.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.544
ALQ09359.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.544
ALQ07527.1
Dimethylallyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.539
ALQ07975.1
Fructosamine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.539
Your Current Organism:
Pseudoalteromonas sp. Bsw20308
NCBI taxonomy Id: 283699
Other names: P. sp. Bsw20308
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.