STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALQ08928.1Cytochrome C biogenesis protein CcmE; CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)    
Predicted Functional Partners:
ALQ08930.1
Heme ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
ALQ08931.1
With CcmABCE is involved in the transport of protoheme IX; CcmB is required for the release of holoCcmE from CcmC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
ALQ08929.1
Heme transporter CcmD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
ALQ08932.1
Cytochrome C biogenesis protein CcmA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
ALQ08927.1
Cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.989
ALQ08926.1
Disulfide bond formation protein DsbE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.987
ALQ08925.1
Cytochrome C biogenesis protein CcmH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.982
ALQ08924.1
Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.977
ALQ08923.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.888
ALQ08933.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.769
Your Current Organism:
Pseudoalteromonas sp. Bsw20308
NCBI taxonomy Id: 283699
Other names: P. sp. Bsw20308
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